Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-dependent extradiol dioxygenase hsac | YT1_RS05395 | Not Available | Positive | 934107 - 935009 | 33688.3 |
| 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase reductase subunit | YT1_RS05400 | Not Available | Positive | 935006 - 935581 | 21043.8 |
| duf4190 domain-containing protein | YT1_RS05405 | Not Available | Negative | 935609 - 936112 | 17368.2 |
| prc-barrel domain-containing protein | YT1_RS05410 | Not Available | Negative | 936109 - 936768 | 23421.6 |
| acetoacetate decarboxylase family protein | YT1_RS05415 | Not Available | Negative | 936845 - 937561 | 25326.6 |
| aldo/keto reductase | YT1_RS05420 | Not Available | Negative | 937763 - 938638 | 32249.8 |
| duf1254 domain-containing protein | YT1_RS05425 | Not Available | Negative | 938849 - 940279 | 52273.3 |
| acyl-coa dehydrogenase family protein | YT1_RS05430 | Not Available | Negative | 940573 - 941622 | 37193.2 |
| acyl-coa dehydrogenase family protein | YT1_RS05435 | Not Available | Negative | 941619 - 942587 | 33057.2 |
| acyl-coa dehydrogenase family protein | YT1_RS05440 | Not Available | Negative | 942584 - 943744 | 42580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


