Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| daunorubicin resistance protein drra family abc transporter atp-binding protein | YT1_RS05195 | Not Available | Positive | 890958 - 891941 | 34622.6 |
| abc transporter permease | YT1_RS05200 | Not Available | Positive | 891938 - 892741 | 29417.8 |
| trehalose-phosphatase | YT1_RS05205 | Not Available | Positive | 892887 - 896846 | 146859.0 |
| tigr02611 family protein | YT1_RS05210 | Not Available | Negative | 896862 - 897263 | 15141.8 |
| hypothetical protein | YT1_RS05215 | Not Available | Negative | 897468 - 897815 | 11499.7 |
| patatin-like phospholipase family protein | YT1_RS05220 | Not Available | Negative | 897921 - 898994 | 38901.9 |
| duf5914 domain-containing protein | YT1_RS05225 | Not Available | Negative | 899093 - 900130 | 37527.6 |
| fad-dependent oxidoreductase | YT1_RS05230 | Not Available | Negative | 900127 - 901692 | 56785.4 |
| hypothetical protein | YT1_RS05235 | Not Available | Negative | 901792 - 902028 | 8597.0 |
| duf4038 domain-containing protein | YT1_RS05240 | Not Available | Positive | 902333 - 903766 | 51825.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


