Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose-phosphatase | YT1_RS05145 | Not Available | Negative | 878738 - 881332 | 92848.8 |
| cholesterol catabolism transcriptional regulator kstr | YT1_RS05150 | Not Available | Negative | 881427 - 882089 | 24028.0 |
| acyl-coa dehydrogenase | YT1_RS05155 | Not Available | Positive | 882182 - 884326 | 74847.2 |
| acyl-coa dehydrogenase family protein | YT1_RS05160 | Not Available | Positive | 884392 - 885450 | 35975.7 |
| acyl-coa dehydrogenase family protein | YT1_RS05165 | Not Available | Positive | 885435 - 886586 | 42345.4 |
| bifunctional maoc family dehydratase n-terminal/ob-fold nucleic acid binding domain-containing protein | YT1_RS05170 | Not Available | Positive | 886601 - 887638 | 37974.7 |
| maoc family dehydratase | YT1_RS05175 | Not Available | Positive | 887635 - 888036 | 14230.0 |
| lipid-transfer protein | YT1_RS05180 | Not Available | Positive | 888033 - 889205 | 40878.3 |
| tetr/acrr family transcriptional regulator | YT1_RS05185 | Not Available | Positive | 889287 - 890003 | 26258.1 |
| sdr family oxidoreductase | YT1_RS05190 | Not Available | Positive | 890062 - 890880 | 28035.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


