Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | YT1_RS05045 | Not Available | Positive | 852686 - 853927 | 43187.9 |
| type ii toxin-antitoxin system rata family toxin | YT1_RS05050 | Not Available | Positive | 853951 - 854409 | 16529.5 |
| bifunctional lysylphosphatidylglycerol flippase/synthetase mprf | YT1_RS05055 | Not Available | Positive | 854406 - 855431 | 37779.1 |
| nad(p)/fad-dependent oxidoreductase | YT1_RS05060 | Not Available | Positive | 855443 - 856843 | 50262.2 |
| nad(p)/fad-dependent oxidoreductase | YT1_RS05065 | Not Available | Positive | 856840 - 858255 | 52444.8 |
| alpha/beta fold hydrolase | YT1_RS05070 | Not Available | Positive | 858257 - 859162 | 33161.9 |
| alpha/beta hydrolase | YT1_RS05075 | Not Available | Positive | 859152 - 860072 | 33406.1 |
| nad(p)/fad-dependent oxidoreductase | YT1_RS05080 | Not Available | Positive | 860077 - 861867 | 67200.5 |
| is982 family transposase | YT1_RS05085 | Not Available | Negative | 861886 - 862794 | 33888.8 |
| cation:proton antiporter | YT1_RS05090 | Not Available | Positive | 862913 - 864256 | 44973.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


