Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5994 family protein | YT1_RS04495 | Not Available | Negative | 739089 - 739577 | 17878.1 |
| Trna-pro | Not Available | Not Available | Positive | 739773 - 739846 | Not Available |
| metallophosphoesterase | YT1_RS04505 | Not Available | Negative | 739901 - 740854 | 34392.2 |
| gatb/yqey domain-containing protein | YT1_RS04510 | Not Available | Positive | 740920 - 741396 | 16877.2 |
| penicillin-binding protein | YT1_RS04515 | Not Available | Negative | 741452 - 743803 | 82207.0 |
| whib family transcriptional regulator | YT1_RS04520 | Not Available | Positive | 744105 - 744428 | 12232.7 |
| arsa family atpase | YT1_RS04525 | Not Available | Negative | 744484 - 745623 | 40823.3 |
| arsa-related p-loop atpase | YT1_RS04530 | Not Available | Negative | 745620 - 746633 | 35459.5 |
| duf4177 domain-containing protein | YT1_RS04535 | Not Available | Positive | 746676 - 746840 | 5994.14 |
| rida family protein | YT1_RS04540 | Not Available | Positive | 746846 - 747325 | 15749.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


