Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | YT1_RS04345 | Not Available | Negative | 706516 - 707196 | 24731.5 |
| adp-ribosylglycohydrolase family protein | YT1_RS04350 | Not Available | Positive | 707264 - 708262 | 34696.8 |
| o-acetyl-adp-ribose deacetylase | YT1_RS04355 | Not Available | Positive | 708259 - 708768 | 17582.2 |
| transposase | YT1_RS04360 | Not Available | Positive | 708888 - 710573 | 58992.7 |
| glycoside hydrolase family 65 protein | YT1_RS04365 | Not Available | Negative | 710707 - 713139 | 92161.5 |
| trehalose-phosphatase | YT1_RS04370 | Not Available | Negative | 713176 - 713988 | 29262.0 |
| hypothetical protein | YT1_RS04375 | Not Available | Negative | 714236 - 714670 | 15304.6 |
| arsr/smtb family transcription factor | YT1_RS04380 | Not Available | Positive | 714800 - 715129 | 11860.2 |
| cation diffusion facilitator family transporter | YT1_RS04385 | Not Available | Positive | 715129 - 715848 | 25079.4 |
| duf3703 domain-containing protein | YT1_RS04390 | Not Available | Positive | 715848 - 716189 | 12480.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


