Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS04150 | Not Available | Negative | 666380 - 666613 | 7795.34 |
| antar domain-containing protein | YT1_RS04155 | Not Available | Positive | 666869 - 667594 | 25701.4 |
| type 1 glutamine amidotransferase | YT1_RS04160 | Not Available | Negative | 667775 - 668482 | 24732.7 |
| mur ligase family protein | YT1_RS04165 | Not Available | Negative | 668475 - 669728 | 43877.1 |
| potassium channel family protein | YT1_RS04170 | Not Available | Positive | 669885 - 671252 | 47616.0 |
| duf488 family protein | YT1_RS04175 | Not Available | Positive | 671321 - 671857 | 20021.7 |
| crotonase/enoyl-coa hydratase family protein | YT1_RS04180 | Not Available | Negative | 671854 - 672636 | 26782.0 |
| shoct domain-containing protein | YT1_RS04185 | Not Available | Negative | 672788 - 673162 | 14062.2 |
| 2-isopropylmalate synthase | YT1_RS04190 | Not Available | Negative | 673295 - 675103 | 66062.6 |
| duf4185 domain-containing protein | YT1_RS04195 | Not Available | Positive | 675470 - 676687 | 42674.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


