Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 22437 - 22509 | Not Available |
| hypothetical protein | YT1_RS01155 | Not Available | Negative | 22612 - 22920 | 11810.2 |
| marr family winged helix-turn-helix transcriptional regulator | YT1_RS01160 | Not Available | Negative | 23010 - 23462 | 15996.3 |
| type 1 glutamine amidotransferase family protein | YT1_RS01165 | Not Available | Negative | 23459 - 24070 | 22051.1 |
| hypothetical protein | YT1_RS01170 | Not Available | Positive | 24262 - 24762 | 16037.1 |
| copper chaperone pcu(a)c | YT1_RS01175 | Not Available | Positive | 24842 - 25351 | 17139.8 |
| dyp-type peroxidase | YT1_RS01180 | Not Available | Positive | 25344 - 26528 | 41753.3 |
| r2-like ligand-binding oxidase | YT1_RS01185 | Not Available | Positive | 26676 - 27635 | 36258.5 |
| hypothetical protein | YT1_RS01190 | Not Available | Negative | 27645 - 28826 | 39614.7 |
| hypothetical protein | YT1_RS01195 | Not Available | Negative | 29032 - 29712 | 24771.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


