Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| queuosine precursor transporter | YT1_RS03760 | Not Available | Negative | 586794 - 587519 | 26379.3 |
| hypothetical protein | YT1_RS03765 | Not Available | Negative | 587613 - 588629 | 34376.7 |
| hypothetical protein | YT1_RS03770 | Not Available | Negative | 588679 - 589614 | 32615.2 |
| trna glutamyl-q(34) synthetase gluqrs | YT1_RS03775 | Not Available | Negative | 589761 - 590684 | 33085.3 |
| lysr family transcriptional regulator | YT1_RS03780 | Not Available | Negative | 590746 - 591648 | 31947.4 |
| mfs transporter | YT1_RS03785 | Not Available | Positive | 591772 - 593157 | 49484.8 |
| 3-hydroxybutyrate dehydrogenase | YT1_RS03790 | Not Available | Positive | 593154 - 593891 | 25990.2 |
| tetr/acrr family transcriptional regulator | YT1_RS03795 | Not Available | Negative | 593995 - 594579 | 20725.9 |
| superoxide dismutase family protein | YT1_RS03800 | Not Available | Negative | 594678 - 595328 | 22077.8 |
| membrane protein | YT1_RS03805 | Not Available | Negative | 595377 - 595781 | 13907.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


