Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin-containing monooxygenase | YT1_RS03710 | Not Available | Negative | 573784 - 575301 | 55912.8 |
| pucr family transcriptional regulator | YT1_RS03715 | Not Available | Positive | 575487 - 576674 | 42843.6 |
| lysr family transcriptional regulator argp | YT1_RS03720 | Not Available | Negative | 576745 - 577623 | 32631.1 |
| lyse/argo family amino acid transporter | YT1_RS03725 | Not Available | Positive | 577696 - 578295 | 20241.5 |
| pyridoxamine 5'-phosphate oxidase family protein | YT1_RS03730 | Not Available | Negative | 578309 - 578725 | 15642.5 |
| cation-translocating p-type atpase | YT1_RS03735 | Not Available | Positive | 578879 - 581602 | 95688.8 |
| duf6448 family protein | YT1_RS03740 | Not Available | Negative | 581856 - 582380 | 18964.4 |
| amidohydrolase family protein | YT1_RS03745 | Not Available | Positive | 582682 - 583584 | 32244.9 |
| mfs transporter | YT1_RS03750 | Not Available | Positive | 584341 - 585471 | 37493.0 |
| trna guanosine(34) transglycosylase tgt | YT1_RS03755 | Not Available | Positive | 585497 - 586762 | 46713.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


