Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | YT1_RS03660 | Not Available | Negative | 561028 - 561603 | 20778.2 |
| hypothetical protein | YT1_RS03665 | Not Available | Positive | 561700 - 562698 | 32785.2 |
| rrf2 family transcriptional regulator | YT1_RS03670 | Not Available | Positive | 562800 - 563261 | 16797.2 |
| tetr/acrr family transcriptional regulator | YT1_RS03675 | Not Available | Positive | 563358 - 563954 | 21223.3 |
| mmpl family transporter | YT1_RS03680 | Not Available | Positive | 563992 - 566334 | 81414.1 |
| abc transporter atp-binding protein | YT1_RS03685 | Not Available | Positive | 566417 - 568144 | 61635.1 |
| abc transporter atp-binding protein | YT1_RS03690 | Not Available | Positive | 568141 - 570072 | 70517.5 |
| mfs transporter | YT1_RS03695 | Not Available | Negative | 570176 - 571375 | 39911.4 |
| ws/dgat/mgat family o-acyltransferase | YT1_RS03700 | Not Available | Negative | 571469 - 572785 | 47515.5 |
| alpha/beta hydrolase | YT1_RS03705 | Not Available | Negative | 572823 - 573767 | 33554.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


