Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | YT1_RS03560 | Not Available | Positive | 542511 - 543218 | 25279.8 |
| Trna-ser | Not Available | Not Available | Positive | 543295 - 543386 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 543458 - 543530 | Not Available |
| mbl fold metallo-hydrolase | YT1_RS03575 | Not Available | Negative | 543592 - 544941 | 49265.3 |
| sulfite exporter taue/safe family protein | YT1_RS03580 | Not Available | Negative | 545031 - 545804 | 26031.6 |
| very short patch repair endonuclease | YT1_RS03585 | Not Available | Negative | 545824 - 546249 | 15952.8 |
| dna cytosine methyltransferase | YT1_RS03590 | Not Available | Negative | 546267 - 547412 | 41435.3 |
| hypothetical protein | YT1_RS03595 | Not Available | Negative | 547535 - 547783 | 8495.13 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 548400 - 549922 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 550223 - 553356 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


