Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family partition protein | YT1_RS26925 | Not Available | Negative | 5663092 - 5664165 | 38018.6 |
| para family protein | YT1_RS26930 | Not Available | Negative | 5664162 - 5665166 | 35313.9 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | YT1_RS26935 | Not Available | Negative | 5666006 - 5666686 | 24657.1 |
| protein jag | YT1_RS26940 | Not Available | Negative | 5666788 - 5667333 | 19608.7 |
| membrane protein insertase yidc | YT1_RS26945 | Not Available | Negative | 5667355 - 5668461 | 40206.4 |
| membrane protein insertion efficiency factor yidd | YT1_RS26950 | Not Available | Negative | 5668532 - 5668813 | 10574.9 |
| ribonuclease p protein component | YT1_RS26955 | Not Available | Negative | 5668810 - 5669187 | 13884.0 |
| 50s ribosomal protein l34 | YT1_RS26960 | Not Available | Negative | 5669209 - 5669352 | 5507.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


