Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4185 domain-containing protein | YT1_RS26825 | Not Available | Positive | 5635805 - 5637349 | 54975.3 |
| sulfate/molybdate abc transporter atp-binding protein | YT1_RS26830 | Not Available | Negative | 5637427 - 5638485 | 36044.3 |
| abc transporter permease | YT1_RS26835 | Not Available | Negative | 5638482 - 5639276 | 27611.9 |
| molybdate abc transporter substrate-binding protein | YT1_RS26840 | Not Available | Negative | 5639273 - 5640034 | 24708.9 |
| molybdopterin-binding protein | YT1_RS26845 | Not Available | Negative | 5640031 - 5640435 | 14093.0 |
| bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha | YT1_RS26850 | Not Available | Negative | 5640496 - 5644542 | 147482.0 |
| catalase/peroxidase hpi | YT1_RS26855 | Not Available | Negative | 5644785 - 5646971 | 80152.7 |
| fur family transcriptional regulator | YT1_RS26860 | Not Available | Negative | 5647011 - 5647454 | 15945.7 |
| cca trna nucleotidyltransferase | YT1_RS26865 | Not Available | Negative | 5647560 - 5649014 | 54080.6 |
| nudix hydrolase | YT1_RS26870 | Not Available | Positive | 5649113 - 5649706 | 21582.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


