Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | YT1_RS03460 | Not Available | Positive | 519857 - 520873 | 37981.1 |
| nad-dependent epimerase/dehydratase family protein | YT1_RS03465 | Not Available | Negative | 520831 - 521799 | 33783.1 |
| glycosyltransferase | YT1_RS03470 | Not Available | Negative | 521802 - 522803 | 35621.9 |
| glycosyltransferase family 2 protein | YT1_RS03475 | Not Available | Positive | 522964 - 523803 | 30145.1 |
| hypothetical protein | YT1_RS03480 | Not Available | Negative | 523851 - 526091 | 80318.0 |
| glycosyltransferase | YT1_RS03485 | Not Available | Positive | 526271 - 528172 | 70018.1 |
| glycosyltransferase family 39 protein | YT1_RS03490 | Not Available | Positive | 528176 - 529687 | 54799.3 |
| tylf/mycf/novp-related o-methyltransferase | YT1_RS03495 | Not Available | Negative | 529691 - 530545 | 31454.2 |
| glycosyltransferase | YT1_RS03500 | Not Available | Negative | 530677 - 531576 | 33561.2 |
| abc transporter atp-binding protein | YT1_RS03505 | Not Available | Negative | 531573 - 532397 | 30289.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


