Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vancomycin high temperature exclusion protein | YT1_RS26725 | Not Available | Positive | 5614649 - 5615311 | 23044.3 |
| sdr family oxidoreductase | YT1_RS26730 | Not Available | Positive | 5615321 - 5615992 | 23408.3 |
| duf6777 domain-containing protein | YT1_RS27415 | Not Available | Negative | 5616043 - 5616846 | 27591.2 |
| hemolysin family protein | YT1_RS26740 | Not Available | Negative | 5617126 - 5618406 | 45261.6 |
| nuclear transport factor 2 family protein | YT1_RS26745 | Not Available | Negative | 5618541 - 5618924 | 13806.4 |
| hemolysin family protein | YT1_RS26750 | Not Available | Negative | 5619038 - 5620051 | 36181.0 |
| hemolysin family protein | YT1_RS26755 | Not Available | Negative | 5620044 - 5621414 | 48651.8 |
| alpha/beta hydrolase | YT1_RS26760 | Not Available | Positive | 5621690 - 5622508 | 29411.7 |
| chorismate mutase | YT1_RS26765 | Not Available | Negative | 5622670 - 5622975 | 10535.6 |
| leucine--trna ligase | YT1_RS26770 | Not Available | Negative | 5623027 - 5625888 | 105975.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


