Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | YT1_RS26625 | Not Available | Negative | 5591408 - 5592451 | 40356.3 |
| propane 2-monooxygenase effector subunit mimd | YT1_RS26630 | Not Available | Negative | 5592530 - 5592865 | 12271.4 |
| aromatic/alkene monooxygenase hydroxylase subunit beta | YT1_RS26635 | Not Available | Negative | 5592868 - 5593974 | 41789.0 |
| fad-binding oxidoreductase | YT1_RS26640 | Not Available | Negative | 5594025 - 5595068 | 38345.3 |
| methane monooxygenase | YT1_RS26645 | Not Available | Negative | 5595160 - 5596788 | 63185.6 |
| sigma-54-dependent fis family transcriptional regulator | YT1_RS26650 | Not Available | Positive | 5596952 - 5598763 | 65451.8 |
| catalase | YT1_RS26655 | Not Available | Positive | 5598870 - 5600327 | 54315.3 |
| glucosylglycerate hydrolase | YT1_RS26660 | Not Available | Negative | 5600421 - 5601758 | 49886.9 |
| abc transporter atp-binding protein | YT1_RS26665 | Not Available | Positive | 5601947 - 5603029 | 38525.3 |
| had family hydrolase | YT1_RS26670 | Not Available | Negative | 5603083 - 5603763 | 24043.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


