Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS26575 | Not Available | Positive | 5577796 - 5578944 | 41489.6 |
| caib/baif coa transferase family protein | YT1_RS26580 | Not Available | Negative | 5579029 - 5580144 | 38825.2 |
| aldehyde dehydrogenase family protein | YT1_RS26585 | Not Available | Negative | 5580141 - 5581607 | 50572.0 |
| acyl-coa dehydrogenase family protein | YT1_RS26590 | Not Available | Negative | 5581640 - 5582833 | 42619.8 |
| 4-aminobutyrate--2-oxoglutarate transaminase | YT1_RS26595 | Not Available | Negative | 5582862 - 5584220 | 47757.2 |
| nad-glutamate dehydrogenase domain-containing protein | YT1_RS26600 | Not Available | Positive | 5584398 - 5587520 | 112867.0 |
| putative quinol monooxygenase | YT1_RS26605 | Not Available | Negative | 5587526 - 5587852 | 12371.6 |
| chaperonin groel | YT1_RS26610 | Not Available | Negative | 5587953 - 5589602 | 58136.6 |
| nad(p)-dependent alcohol dehydrogenase | YT1_RS26615 | Not Available | Negative | 5589640 - 5590665 | 35821.0 |
| iron-sulfur cluster assembly protein | YT1_RS26620 | Not Available | Negative | 5590662 - 5591411 | 27058.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


