Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3556 domain-containing protein | YT1_RS26525 | Not Available | Negative | 5561938 - 5563725 | 65700.2 |
| class i adenylate-forming enzyme family protein | YT1_RS26530 | Not Available | Negative | 5563808 - 5565268 | 51815.1 |
| amino acid permease | YT1_RS26535 | Not Available | Negative | 5565429 - 5566898 | 52192.1 |
| permease | YT1_RS26540 | Not Available | Negative | 5567069 - 5568490 | 50503.7 |
| hydantoinase b/oxoprolinase family protein | YT1_RS26545 | Not Available | Negative | 5568658 - 5570619 | 70887.1 |
| hydantoinase/oxoprolinase family protein | YT1_RS26550 | Not Available | Negative | 5570616 - 5572679 | 74151.8 |
| pucr family transcriptional regulator | YT1_RS26555 | Not Available | Positive | 5572790 - 5574349 | 56980.4 |
| pucr family transcriptional regulator | YT1_RS26560 | Not Available | Positive | 5574378 - 5575928 | 54395.0 |
| res family nad+ phosphorylase | YT1_RS26565 | Not Available | Negative | 5576067 - 5576711 | 23371.0 |
| hypothetical protein | YT1_RS26570 | Not Available | Negative | 5576719 - 5577318 | 21029.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


