Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS26325 | Not Available | Positive | 5524699 - 5525250 | 19208.4 |
| padr family transcriptional regulator | YT1_RS26330 | Not Available | Positive | 5525371 - 5525928 | 21027.0 |
| inositol-3-phosphate synthase | YT1_RS26335 | Not Available | Positive | 5525921 - 5527009 | 39198.6 |
| sdr family oxidoreductase | YT1_RS26340 | Not Available | Negative | 5527174 - 5527926 | 27053.8 |
| phosphotransferase family protein | YT1_RS26345 | Not Available | Negative | 5527923 - 5528993 | 39632.0 |
| acyl-coa dehydrogenase family protein | YT1_RS26350 | Not Available | Negative | 5528990 - 5530240 | 45553.5 |
| tetr/acrr family transcriptional regulator | YT1_RS26355 | Not Available | Positive | 5530323 - 5530979 | 23669.4 |
| transglycosylase domain-containing protein | YT1_RS26360 | Not Available | Negative | 5530882 - 5533023 | 74965.9 |
| hypothetical protein | YT1_RS26365 | Not Available | Negative | 5533194 - 5533391 | 7020.97 |
| carbohydrate abc transporter permease | YT1_RS26370 | Not Available | Negative | 5533388 - 5534239 | 30460.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


