Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | YT1_RS26275 | Not Available | Negative | 5514656 - 5515168 | 17551.2 |
| 30s ribosomal protein s6 | YT1_RS26280 | Not Available | Negative | 5515233 - 5515520 | 10701.0 |
| glycosyltransferase 87 family protein | YT1_RS26285 | Not Available | Positive | 5515651 - 5516994 | 48701.9 |
| cd225/dispanin family protein | YT1_RS26290 | Not Available | Positive | 5517119 - 5517469 | 12362.8 |
| duf2752 domain-containing protein | YT1_RS26295 | Not Available | Positive | 5517481 - 5517894 | 14890.5 |
| glycosyltransferase family 87 protein | YT1_RS26300 | Not Available | Negative | 5517993 - 5519570 | 56974.3 |
| transglycosylase domain-containing protein | YT1_RS26305 | Not Available | Negative | 5519580 - 5522012 | 85155.5 |
| duf5318 domain-containing protein | YT1_RS26310 | Not Available | Negative | 5522525 - 5522947 | 15604.7 |
| duf1707 domain-containing protein | YT1_RS26315 | Not Available | Positive | 5523042 - 5523857 | 28626.1 |
| duf1707 domain-containing protein | YT1_RS26320 | Not Available | Positive | 5523881 - 5524702 | 28727.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


