Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeih family protein | YT1_RS26225 | Not Available | Positive | 5501570 - 5502613 | 34545.5 |
| gamma-glutamyltransferase | YT1_RS26230 | Not Available | Positive | 5502783 - 5504744 | 67323.5 |
| cbs domain-containing protein | YT1_RS26235 | Not Available | Positive | 5504879 - 5505307 | 15538.8 |
| hypothetical protein | YT1_RS26240 | Not Available | Positive | 5505413 - 5506084 | 23471.9 |
| cutinase family protein | YT1_RS26245 | Not Available | Negative | 5506075 - 5507802 | 59277.0 |
| tigr03618 family f420-dependent ppox class oxidoreductase | YT1_RS26250 | Not Available | Positive | 5508048 - 5508464 | 15296.3 |
| mfs transporter | YT1_RS26255 | Not Available | Positive | 5508806 - 5510107 | 44766.0 |
| replicative dna helicase | YT1_RS26260 | Not Available | Negative | 5510217 - 5513426 | 115193.0 |
| 50s ribosomal protein l9 | YT1_RS26265 | Not Available | Negative | 5513895 - 5514350 | 15710.1 |
| 30s ribosomal protein s18 | YT1_RS26270 | Not Available | Negative | 5514370 - 5514612 | 9189.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


