Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylsulfone monooxygenase sfng | YT1_RS26175 | Not Available | Positive | 5492066 - 5493187 | 42428.4 |
| nadph-dependent fmn reductase | YT1_RS26180 | Not Available | Negative | 5493198 - 5493689 | 16896.3 |
| winged helix-turn-helix domain-containing protein | YT1_RS26185 | Not Available | Negative | 5493918 - 5494430 | 18602.6 |
| flavin reductase family protein | YT1_RS26190 | Not Available | Negative | 5494532 - 5495095 | 20106.6 |
| nadph-dependent oxidoreductase | YT1_RS26195 | Not Available | Negative | 5495327 - 5496223 | 32284.2 |
| llm class flavin-dependent oxidoreductase | YT1_RS26200 | Not Available | Negative | 5496267 - 5497385 | 41191.8 |
| isopenicillin n synthase family dioxygenase | YT1_RS26205 | Not Available | Positive | 5497878 - 5498942 | 38379.4 |
| metq/nlpa family abc transporter substrate-binding protein | YT1_RS26210 | Not Available | Positive | 5498939 - 5499778 | 29396.3 |
| methionine abc transporter atp-binding protein | YT1_RS26215 | Not Available | Positive | 5499775 - 5500785 | 35578.7 |
| methionine abc transporter permease | YT1_RS26220 | Not Available | Positive | 5500782 - 5501450 | 23253.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


