Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | YT1_RS26125 | Not Available | Positive | 5480020 - 5481123 | 39175.9 |
| ntaa/dmoa family fmn-dependent monooxygenase | YT1_RS26130 | Not Available | Positive | 5481138 - 5482508 | 50705.2 |
| duf1684 domain-containing protein | YT1_RS26135 | Not Available | Positive | 5482505 - 5483281 | 28054.8 |
| llm class flavin-dependent oxidoreductase | YT1_RS26140 | Not Available | Positive | 5483278 - 5484432 | 40396.1 |
| hypothetical protein | YT1_RS26145 | Not Available | Positive | 5484675 - 5485253 | 20733.7 |
| llm class flavin-dependent oxidoreductase | YT1_RS26150 | Not Available | Positive | 5485425 - 5486597 | 41395.1 |
| sfnb family sulfur acquisition oxidoreductase | YT1_RS26155 | Not Available | Positive | 5486599 - 5487813 | 42166.4 |
| acyl-coa dehydrogenase family protein | YT1_RS26160 | Not Available | Positive | 5487936 - 5489153 | 43788.4 |
| llm class flavin-dependent oxidoreductase | YT1_RS26165 | Not Available | Positive | 5489150 - 5490562 | 52019.8 |
| styrene monooxygenase/indole monooxygenase family protein | YT1_RS26170 | Not Available | Positive | 5490592 - 5491965 | 48952.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


