Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | YT1_RS26075 | Not Available | Positive | 5467523 - 5468494 | 34378.0 |
| fad-dependent oxidoreductase | YT1_RS26080 | Not Available | Positive | 5468523 - 5469653 | 39660.0 |
| gnat family n-acetyltransferase | YT1_RS26085 | Not Available | Positive | 5469650 - 5470153 | 18725.4 |
| llm class flavin-dependent oxidoreductase | YT1_RS26090 | Not Available | Positive | 5470505 - 5471749 | 46153.2 |
| ntaa/dmoa family fmn-dependent monooxygenase | YT1_RS26095 | Not Available | Positive | 5471746 - 5473104 | 50217.0 |
| mfs transporter | YT1_RS26100 | Not Available | Positive | 5473117 - 5474538 | 47211.9 |
| abc transporter substrate-binding protein | YT1_RS26105 | Not Available | Positive | 5474880 - 5476511 | 57136.5 |
| abc transporter permease | YT1_RS26110 | Not Available | Positive | 5476515 - 5477546 | 36053.2 |
| abc transporter permease | YT1_RS26115 | Not Available | Positive | 5477539 - 5478432 | 30759.9 |
| dipeptide abc transporter atp-binding protein | YT1_RS26120 | Not Available | Positive | 5478429 - 5480030 | 57711.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


