Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdhf/ydep family oxidoreductase | YT1_RS26035 | Not Available | Negative | 5457052 - 5459421 | 87118.2 |
| fmn-binding glutamate synthase family protein | YT1_RS26040 | Not Available | Positive | 5459588 - 5461162 | 55906.8 |
| hypothetical protein | YT1_RS27410 | Not Available | Positive | 5461264 - 5461425 | 5415.7 |
| ms4533a family cys-rich leader peptide | YT1_RS27890 | Not Available | Positive | 5461436 - 5461528 | 3233.01 |
| sulfate abc transporter substrate-binding protein | YT1_RS26045 | Not Available | Positive | 5461739 - 5462770 | 36400.2 |
| sulfate abc transporter permease subunit cyst | YT1_RS26050 | Not Available | Positive | 5462808 - 5463659 | 29560.6 |
| sulfate abc transporter permease subunit cysw | YT1_RS26055 | Not Available | Positive | 5463656 - 5464462 | 28740.2 |
| sulfate/molybdate abc transporter atp-binding protein | YT1_RS26060 | Not Available | Positive | 5464459 - 5465472 | 36731.0 |
| amino acid abc transporter permease | YT1_RS26065 | Not Available | Positive | 5465752 - 5466723 | 35322.4 |
| amino acid abc transporter atp-binding protein | YT1_RS26070 | Not Available | Positive | 5466720 - 5467502 | 28836.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


