Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS25985 | Not Available | Positive | 5443016 - 5443231 | 7810.27 |
| tspo/mbr family protein | YT1_RS25990 | Not Available | Negative | 5443245 - 5443736 | 17217.7 |
| abc transporter permease | YT1_RS25995 | Not Available | Negative | 5444079 - 5445797 | 59078.7 |
| abc transporter atp-binding protein | YT1_RS26000 | Not Available | Negative | 5445794 - 5446735 | 34069.4 |
| cation-translocating p-type atpase | YT1_RS26005 | Not Available | Negative | 5446808 - 5449390 | 89758.1 |
| mfs transporter | YT1_RS26010 | Not Available | Negative | 5449613 - 5450914 | 46859.8 |
| class i adenylate-forming enzyme family protein | YT1_RS26015 | Not Available | Negative | 5451037 - 5452704 | 59910.0 |
| fha domain-containing protein | YT1_RS26020 | Not Available | Positive | 5452993 - 5455311 | 81987.0 |
| hypothetical protein | YT1_RS26025 | Not Available | Negative | 5455328 - 5455906 | 20578.7 |
| glxa family transcriptional regulator | YT1_RS26030 | Not Available | Positive | 5455998 - 5457044 | 37086.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


