Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | YT1_RS25935 | Not Available | Negative | 5436079 - 5436525 | 16427.7 |
| dsba family protein | YT1_RS25940 | Not Available | Positive | 5436606 - 5437229 | 23067.2 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | YT1_RS25945 | Not Available | Positive | 5437243 - 5437893 | 23272.0 |
| hypothetical protein | YT1_RS25950 | Not Available | Negative | 5437901 - 5438152 | 8966.17 |
| llm class flavin-dependent oxidoreductase | YT1_RS25955 | Not Available | Negative | 5438200 - 5439345 | 42568.6 |
| esterase/lipase family protein | YT1_RS25960 | Not Available | Positive | 5439462 - 5440277 | 27724.9 |
| duf389 domain-containing protein | YT1_RS25965 | Not Available | Negative | 5440287 - 5441270 | 33538.0 |
| sigma factor-like helix-turn-helix dna-binding protein | YT1_RS25970 | Not Available | Positive | 5441378 - 5441761 | 13902.4 |
| hypothetical protein | YT1_RS25975 | Not Available | Positive | 5441713 - 5442159 | 15756.6 |
| duf6069 family protein | YT1_RS25980 | Not Available | Positive | 5442205 - 5442696 | 16614.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


