Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aim24 family protein | YT1_RS25740 | Not Available | Positive | 5397832 - 5398587 | 27019.1 |
| bacterioferritin-associated ferredoxin | YT1_RS25745 | Not Available | Positive | 5398723 - 5398920 | 7060.5 |
| bacterioferritin | YT1_RS25750 | Not Available | Positive | 5398967 - 5399443 | 18364.8 |
| carboxymuconolactone decarboxylase family protein | YT1_RS25755 | Not Available | Positive | 5399440 - 5399904 | 17401.7 |
| marr family winged helix-turn-helix transcriptional regulator | YT1_RS25760 | Not Available | Positive | 5399949 - 5400410 | 17206.4 |
| gnat family n-acetyltransferase | YT1_RS25765 | Not Available | Positive | 5400428 - 5400718 | 10781.5 |
| putative protein n(5)-glutamine methyltransferase | YT1_RS25770 | Not Available | Positive | 5400742 - 5401521 | 26956.1 |
| cgnr zinc finger domain-containing protein | YT1_RS25775 | Not Available | Negative | 5401552 - 5402073 | 18975.6 |
| hypothetical protein | YT1_RS27405 | Not Available | Positive | 5402099 - 5402269 | 6320.54 |
| duf1992 domain-containing protein | YT1_RS25780 | Not Available | Positive | 5402302 - 5402823 | 20245.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


