Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | YT1_RS25495 | Not Available | Positive | 5345313 - 5345807 | 18860.3 |
| duf485 domain-containing protein | YT1_RS25500 | Not Available | Positive | 5345804 - 5346139 | 12358.1 |
| cation acetate symporter | YT1_RS25505 | Not Available | Positive | 5346136 - 5347752 | 55703.6 |
| hypothetical protein | YT1_RS25510 | Not Available | Negative | 5347803 - 5347991 | 7140.25 |
| dinb family protein | YT1_RS25515 | Not Available | Negative | 5348151 - 5348681 | 19934.3 |
| hypothetical protein | YT1_RS25520 | Not Available | Negative | 5348768 - 5348950 | 6371.17 |
| hypothetical protein | YT1_RS27400 | Not Available | Negative | 5349032 - 5349172 | 4564.63 |
| merr family transcriptional regulator | YT1_RS25525 | Not Available | Positive | 5349317 - 5349739 | 15500.4 |
| aldo/keto reductase | YT1_RS25530 | Not Available | Positive | 5349852 - 5350793 | 33691.1 |
| laci family dna-binding transcriptional regulator | YT1_RS25535 | Not Available | Positive | 5350920 - 5351915 | 34588.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


