Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-ribbon domain-containing ob-fold protein | YT1_RS25445 | Not Available | Negative | 5335873 - 5336283 | 15046.0 |
| maoc family dehydratase n-terminal domain-containing protein | YT1_RS25450 | Not Available | Negative | 5336283 - 5336846 | 21830.7 |
| tetr/acrr family transcriptional regulator | YT1_RS25455 | Not Available | Positive | 5336988 - 5337566 | 21759.7 |
| coa transferase | YT1_RS25460 | Not Available | Negative | 5337589 - 5338794 | 42189.9 |
| acetyl-coa c-acetyltransferase | YT1_RS25465 | Not Available | Negative | 5338791 - 5340026 | 43231.5 |
| amp-binding protein | YT1_RS25470 | Not Available | Negative | 5340013 - 5341713 | 59531.0 |
| alpha/beta fold hydrolase | YT1_RS25475 | Not Available | Negative | 5341710 - 5342567 | 30541.2 |
| hypothetical protein | YT1_RS25480 | Not Available | Negative | 5342564 - 5343307 | 26709.8 |
| acyl-coa dehydrogenase family protein | YT1_RS25485 | Not Available | Negative | 5343304 - 5344500 | 43919.5 |
| tetr/acrr family transcriptional regulator | YT1_RS25490 | Not Available | Negative | 5344588 - 5345190 | 21889.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


