Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | YT1_RS25400 | Not Available | Positive | 5325606 - 5326430 | 29197.2 |
| paai family thioesterase | YT1_RS25405 | Not Available | Negative | 5326511 - 5327116 | 21906.2 |
| acyl-coa dehydrogenase family protein | YT1_RS25410 | Not Available | Negative | 5327205 - 5328332 | 39045.3 |
| acyl-coa dehydrogenase family protein | YT1_RS25415 | Not Available | Negative | 5328334 - 5329542 | 43307.4 |
| acyl-coa dehydrogenase | YT1_RS25420 | Not Available | Negative | 5329575 - 5331776 | 77676.6 |
| steroid 3-ketoacyl-coa thiolase | YT1_RS25425 | Not Available | Negative | 5331780 - 5332916 | 39646.4 |
| hypothetical protein | YT1_RS27865 | Not Available | Negative | 5332913 - 5333038 | 4461.3 |
| degt/dnrj/eryc1/strs family aminotransferase | YT1_RS25430 | Not Available | Negative | 5333035 - 5334240 | 44184.2 |
| lipid-transfer protein | YT1_RS25435 | Not Available | Negative | 5334270 - 5335469 | 42745.4 |
| maoc/paaz c-terminal domain-containing protein | YT1_RS25440 | Not Available | Negative | 5335466 - 5335876 | 14515.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


