Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2231 domain-containing protein | YT1_RS03310 | Not Available | Negative | 476969 - 477433 | 15707.7 |
| merr family transcriptional regulator | YT1_RS03315 | Not Available | Positive | 477566 - 478318 | 27827.6 |
| udp-galactopyranose mutase | YT1_RS03320 | Not Available | Positive | 478392 - 479612 | 46547.3 |
| glycosyltransferase | YT1_RS03325 | Not Available | Positive | 479609 - 481525 | 71111.8 |
| phosphatase pap2 family protein | YT1_RS03330 | Not Available | Positive | 481509 - 482045 | 18443.4 |
| decaprenyl-phosphate phosphoribosyltransferase | YT1_RS03335 | Not Available | Positive | 482042 - 482947 | 32441.1 |
| flagellar motor control protein zomb | YT1_RS03340 | Not Available | Positive | 483006 - 484877 | 67551.9 |
| alpha/beta hydrolase | YT1_RS03345 | Not Available | Positive | 485186 - 486196 | 36330.2 |
| alpha/beta hydrolase-fold protein | YT1_RS03350 | Not Available | Positive | 486454 - 488355 | 67689.8 |
| duf732 domain-containing protein | YT1_RS03355 | Not Available | Positive | 488508 - 489059 | 17849.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


