Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | YT1_RS25250 | Not Available | Negative | 5297171 - 5298841 | 62301.1 |
| llm class flavin-dependent oxidoreductase | YT1_RS25255 | Not Available | Negative | 5298841 - 5299866 | 38079.1 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS25260 | Not Available | Negative | 5299895 - 5300668 | 26558.7 |
| acyl-coa dehydrogenase family protein | YT1_RS25265 | Not Available | Negative | 5300712 - 5301875 | 42099.2 |
| nuclear transport factor 2 family protein | YT1_RS25270 | Not Available | Positive | 5302100 - 5302654 | 21192.0 |
| thiolase family protein | YT1_RS25275 | Not Available | Positive | 5302745 - 5303920 | 40108.8 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS25280 | Not Available | Positive | 5303946 - 5304710 | 26650.2 |
| crotonase/enoyl-coa hydratase family protein | YT1_RS25285 | Not Available | Positive | 5304720 - 5305484 | 27097.4 |
| abc transporter substrate-binding protein | YT1_RS25290 | Not Available | Negative | 5305612 - 5306775 | 39784.4 |
| abc transporter atp-binding protein | YT1_RS25295 | Not Available | Negative | 5306793 - 5307518 | 25580.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


