Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | YT1_RS25200 | Not Available | Negative | 5285874 - 5286950 | 40250.4 |
| amp-binding protein | YT1_RS25205 | Not Available | Negative | 5286935 - 5288605 | 59446.7 |
| aldehyde dehydrogenase family protein | YT1_RS25210 | Not Available | Negative | 5288602 - 5290083 | 51757.5 |
| hypothetical protein | YT1_RS25215 | Not Available | Negative | 5290083 - 5290400 | 11673.8 |
| acyclic terpene utilization atua family protein | YT1_RS25220 | Not Available | Negative | 5290397 - 5291719 | 46797.5 |
| caib/baif coa transferase family protein | YT1_RS25225 | Not Available | Negative | 5291849 - 5293060 | 42801.0 |
| aldehyde dehydrogenase family protein | YT1_RS25230 | Not Available | Negative | 5293134 - 5294615 | 52983.2 |
| maoc family dehydratase | YT1_RS25235 | Not Available | Negative | 5294617 - 5295084 | 17825.5 |
| hpch/hpai aldolase/citrate lyase family protein | YT1_RS25240 | Not Available | Negative | 5295084 - 5295974 | 32717.1 |
| acyl-coa dehydrogenase family protein | YT1_RS25245 | Not Available | Negative | 5295984 - 5297150 | 42956.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


