Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin-containing monooxygenase | YT1_RS25100 | Not Available | Positive | 5263429 - 5265054 | 60346.5 |
| fad-dependent oxidoreductase | YT1_RS25105 | Not Available | Negative | 5265282 - 5267264 | 71612.9 |
| pyridoxamine 5'-phosphate oxidase family protein | YT1_RS25110 | Not Available | Negative | 5267270 - 5267785 | 18664.2 |
| mycofactocin-coupled sdr family oxidoreductase | YT1_RS25115 | Not Available | Negative | 5267792 - 5268631 | 30049.0 |
| maoc family dehydratase | YT1_RS25120 | Not Available | Negative | 5268662 - 5269078 | 14660.6 |
| hypothetical protein | YT1_RS25125 | Not Available | Negative | 5269075 - 5269542 | 16553.7 |
| amp-binding protein | YT1_RS25130 | Not Available | Negative | 5269539 - 5271095 | 56658.8 |
| nuclear transport factor 2 family protein | YT1_RS25135 | Not Available | Negative | 5271111 - 5271518 | 15177.9 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | YT1_RS25140 | Not Available | Negative | 5271634 - 5272719 | 39506.5 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | YT1_RS25145 | Not Available | Negative | 5272716 - 5274653 | 68308.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


