Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | YT1_RS25050 | Not Available | Positive | 5254567 - 5254764 | 6965.09 |
| fadr/gntr family transcriptional regulator | YT1_RS25055 | Not Available | Negative | 5254898 - 5255605 | 26338.8 |
| enoyl-coa hydratase/isomerase family protein | YT1_RS25060 | Not Available | Positive | 5255837 - 5256622 | 27928.2 |
| fadr/gntr family transcriptional regulator | YT1_RS25065 | Not Available | Positive | 5256812 - 5257552 | 27354.8 |
| ndma-dependent alcohol dehydrogenase | YT1_RS25070 | Not Available | Positive | 5257819 - 5258940 | 40052.9 |
| sgcj/ecac family oxidoreductase | YT1_RS25075 | Not Available | Positive | 5259047 - 5259592 | 20892.6 |
| mycofactocin-coupled sdr family oxidoreductase | YT1_RS25080 | Not Available | Positive | 5259632 - 5260474 | 30059.8 |
| flavin-containing monooxygenase | YT1_RS25085 | Not Available | Positive | 5260500 - 5262296 | 64835.8 |
| nuclear transport factor 2 family protein | YT1_RS25090 | Not Available | Positive | 5262328 - 5262750 | 15777.3 |
| ethd family reductase | YT1_RS25095 | Not Available | Negative | 5262831 - 5263139 | 11496.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


