Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| azlc family abc transporter permease | YT1_RS25000 | Not Available | Negative | 5243900 - 5244592 | 24246.0 |
| whib family transcriptional regulator | YT1_RS25005 | Not Available | Negative | 5244523 - 5244897 | 13812.4 |
| glucose-6-phosphate dehydrogenase (coenzyme-f420) | YT1_RS25010 | Not Available | Negative | 5244988 - 5246001 | 36993.0 |
| flavin-containing monooxygenase | YT1_RS25015 | Not Available | Negative | 5246095 - 5247705 | 60124.3 |
| alpha/beta hydrolase | YT1_RS25020 | Not Available | Negative | 5247720 - 5248667 | 33598.7 |
| smp-30/gluconolactonase/lre family protein | YT1_RS25025 | Not Available | Positive | 5248907 - 5249827 | 32187.9 |
| nuclear transport factor 2 family protein | YT1_RS25030 | Not Available | Negative | 5249890 - 5250327 | 15757.2 |
| aldehyde dehydrogenase | YT1_RS25035 | Not Available | Negative | 5250405 - 5251859 | 51809.1 |
| nad(p)/fad-dependent oxidoreductase | YT1_RS25040 | Not Available | Negative | 5251923 - 5253113 | 41769.6 |
| cytochrome p450 | YT1_RS25045 | Not Available | Negative | 5253171 - 5254415 | 47112.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


