Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | YT1_RS03260 | Not Available | Negative | 464037 - 465587 | 57873.8 |
| lysophospholipid acyltransferase family protein | YT1_RS03265 | Not Available | Positive | 465762 - 466523 | 27502.2 |
| cof-type had-iib family hydrolase | YT1_RS03270 | Not Available | Positive | 466586 - 467407 | 28614.8 |
| n-acetylmuramoyl-l-alanine amidase | YT1_RS03275 | Not Available | Negative | 467420 - 469465 | 70383.7 |
| spoiid/lytb domain-containing protein | YT1_RS03280 | Not Available | Positive | 469792 - 471339 | 53769.0 |
| glycosyltransferase | YT1_RS03285 | Not Available | Negative | 471426 - 472535 | 40013.2 |
| padr family transcriptional regulator | YT1_RS03290 | Not Available | Negative | 472678 - 473268 | 22516.5 |
| aromatic ring-hydroxylating oxygenase subunit alpha | YT1_RS03295 | Not Available | Positive | 473394 - 474509 | 41350.9 |
| pdr/vanb family oxidoreductase | YT1_RS03300 | Not Available | Positive | 474511 - 475548 | 36581.6 |
| mfs transporter | YT1_RS03305 | Not Available | Positive | 475591 - 476958 | 46067.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


