Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | YT1_RS24755 | Not Available | Negative | 5193068 - 5193805 | 25279.2 |
| alpha/beta fold hydrolase | YT1_RS24760 | Not Available | Negative | 5193805 - 5194575 | 26672.8 |
| voc family protein | YT1_RS24765 | Not Available | Negative | 5194572 - 5195573 | 36594.9 |
| pdr/vanb family oxidoreductase | YT1_RS24770 | Not Available | Negative | 5195591 - 5196478 | 30703.4 |
| cupin domain-containing protein | YT1_RS24775 | Not Available | Negative | 5196584 - 5197096 | 18597.9 |
| rida family protein | YT1_RS24780 | Not Available | Negative | 5197126 - 5197497 | 13022.3 |
| aldehyde dehydrogenase | YT1_RS24785 | Not Available | Negative | 5197494 - 5199053 | 54919.1 |
| marr family winged helix-turn-helix transcriptional regulator | YT1_RS24790 | Not Available | Negative | 5199295 - 5199816 | 18745.3 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | YT1_RS24795 | Not Available | Negative | 5199897 - 5200649 | 26303.4 |
| nad(p)/fad-dependent oxidoreductase | YT1_RS24800 | Not Available | Negative | 5200773 - 5202143 | 49830.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


