Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | YT1_RS24705 | Not Available | Positive | 5184583 - 5185380 | 28505.0 |
| acetyl-coa c-acetyltransferase | YT1_RS24710 | Not Available | Positive | 5185407 - 5186618 | 41626.9 |
| mfs transporter | YT1_RS24715 | Not Available | Negative | 5186673 - 5187956 | 43334.0 |
| rida family protein | YT1_RS24720 | Not Available | Negative | 5188009 - 5188413 | 14117.8 |
| hypothetical protein | YT1_RS24725 | Not Available | Negative | 5188410 - 5188733 | 12268.7 |
| rieske 2fe-2s domain-containing protein | YT1_RS24730 | Not Available | Negative | 5188730 - 5189824 | 40915.5 |
| recombinase-like helix-turn-helix domain-containing protein | YT1_RS24735 | Not Available | Negative | 5189826 - 5190068 | 8859.43 |
| alpha/beta fold hydrolase | YT1_RS24740 | Not Available | Negative | 5190065 - 5190529 | 15823.8 |
| thiamine pyrophosphate-binding protein | YT1_RS24745 | Not Available | Negative | 5190526 - 5192211 | 58411.4 |
| sdr family oxidoreductase | YT1_RS24750 | Not Available | Negative | 5192243 - 5193028 | 27067.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


