Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS27775 | Not Available | Positive | 5167383 - 5168219 | 29189.4 |
| hypothetical protein | YT1_RS24610 | Not Available | Positive | 5168219 - 5169439 | 44367.1 |
| hypothetical protein | YT1_RS24615 | Not Available | Positive | 5169436 - 5169804 | 13500.8 |
| whib family transcriptional regulator | YT1_RS24620 | Not Available | Negative | 5170007 - 5170258 | 9522.4 |
| lactate utilization protein c | YT1_RS24625 | Not Available | Negative | 5170255 - 5170878 | 22249.8 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | YT1_RS24630 | Not Available | Negative | 5170875 - 5172377 | 53757.6 |
| (fe-s)-binding protein | YT1_RS24635 | Not Available | Negative | 5172374 - 5173138 | 26813.2 |
| l-lactate permease | YT1_RS24640 | Not Available | Positive | 5173326 - 5174993 | 57985.1 |
| fadr/gntr family transcriptional regulator | YT1_RS24645 | Not Available | Positive | 5175101 - 5175853 | 26796.2 |
| Trna-met | Not Available | Not Available | Positive | 5175866 - 5175942 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


