Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS24325 | Not Available | Positive | 5107369 - 5107656 | 10732.6 |
| tmem175 family protein | YT1_RS24330 | Not Available | Positive | 5107705 - 5108316 | 21928.8 |
| mbl fold metallo-hydrolase | YT1_RS24335 | Not Available | Positive | 5108474 - 5109217 | 26739.7 |
| hypothetical protein | YT1_RS27860 | Not Available | Positive | 5109324 - 5109446 | 4440.44 |
| hypothetical protein | YT1_RS24340 | Not Available | Positive | 5109478 - 5109684 | 7863.36 |
| hypothetical protein | YT1_RS27385 | Not Available | Positive | 5109681 - 5109848 | 6132.22 |
| hypothetical protein | YT1_RS24345 | Not Available | Positive | 5109942 - 5111303 | 48638.6 |
| type i restriction endonuclease subunit r | YT1_RS24350 | Not Available | Negative | 5111340 - 5114540 | 118832.0 |
| hypothetical protein | YT1_RS24355 | Not Available | Positive | 5114728 - 5115210 | 16386.2 |
| duf4352 domain-containing protein | YT1_RS24360 | Not Available | Positive | 5115243 - 5115914 | 23909.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


