Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450/oxidoreductase | YT1_RS03210 | Not Available | Positive | 453629 - 455944 | 85235.7 |
| mfs transporter | YT1_RS03215 | Not Available | Positive | 455971 - 457299 | 47427.7 |
| metallopeptidase family protein | YT1_RS03220 | Not Available | Negative | 457562 - 457900 | 12489.6 |
| septum formation family protein | YT1_RS03225 | Not Available | Negative | 457914 - 458990 | 37164.3 |
| ankyrin repeat domain-containing protein | YT1_RS03230 | Not Available | Positive | 459039 - 459428 | 13891.3 |
| serine--trna ligase | YT1_RS03235 | Not Available | Positive | 459471 - 460733 | 45798.5 |
| hypothetical protein | YT1_RS03240 | Not Available | Negative | 460837 - 461229 | 14229.5 |
| paai family thioesterase | YT1_RS03245 | Not Available | Negative | 461261 - 461746 | 17602.8 |
| mfs transporter | YT1_RS03250 | Not Available | Positive | 461843 - 463021 | 39720.2 |
| membrane protein | YT1_RS03255 | Not Available | Positive | 463033 - 464007 | 32754.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


