Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rv2640c family arsr-like transcriptional regulator | YT1_RS24180 | Not Available | Positive | 5079966 - 5080325 | 12628.5 |
| amidohydrolase family protein | YT1_RS24185 | Not Available | Negative | 5080392 - 5081267 | 32840.0 |
| abc transporter atp-binding protein | YT1_RS24190 | Not Available | Negative | 5081351 - 5082106 | 27536.2 |
| iron chelate uptake abc transporter family permease subunit | YT1_RS24195 | Not Available | Negative | 5082103 - 5083089 | 35271.4 |
| abc transporter permease | YT1_RS24200 | Not Available | Negative | 5083086 - 5084114 | 36084.6 |
| siderophore abc transporter substrate-binding protein | YT1_RS24205 | Not Available | Negative | 5084128 - 5084985 | 30220.1 |
| hypothetical protein | YT1_RS27755 | Not Available | Positive | 5084978 - 5085118 | 4746.41 |
| acryloyl-coa reductase | YT1_RS24210 | Not Available | Positive | 5085264 - 5086268 | 34669.5 |
| ribonuclease h | YT1_RS24215 | Not Available | Negative | 5086276 - 5086863 | 20833.9 |
| dna-3-methyladenine glycosylase family protein | YT1_RS24220 | Not Available | Positive | 5087053 - 5087991 | 34410.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


