Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | YT1_RS24130 | Not Available | Positive | 5068711 - 5069112 | 14223.1 |
| acr3 family arsenite efflux transporter | YT1_RS24135 | Not Available | Positive | 5069109 - 5070188 | 38687.5 |
| arsenate reductase arsc | YT1_RS24140 | Not Available | Positive | 5070212 - 5070871 | 23381.9 |
| arsenate reductase arsc | YT1_RS24145 | Not Available | Positive | 5070891 - 5071307 | 14341.2 |
| duf2703 domain-containing protein | YT1_RS24150 | Not Available | Positive | 5071426 - 5071827 | 14170.0 |
| arso family nad(p)h-dependent flavin-containing monooxygenase | YT1_RS24155 | Not Available | Positive | 5071871 - 5072932 | 38281.7 |
| dihydroorotate dehydrogenase-like protein | YT1_RS24160 | Not Available | Negative | 5072995 - 5074005 | 35890.6 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | YT1_RS24165 | Not Available | Negative | 5074005 - 5077577 | 129201.0 |
| nad(p)-binding protein | YT1_RS24170 | Not Available | Negative | 5077574 - 5079250 | 60302.5 |
| arsi/cadi family heavy metal resistance metalloenzyme | YT1_RS24175 | Not Available | Negative | 5079374 - 5079874 | 17737.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


