Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03086 family metal-binding protein | YT1_RS24030 | Not Available | Positive | 5046956 - 5047528 | 21112.7 |
| dihydroxy-acid dehydratase | YT1_RS24035 | Not Available | Positive | 5047678 - 5049372 | 58642.4 |
| arsr/smtb family transcription factor | YT1_RS24040 | Not Available | Negative | 5049426 - 5049788 | 13340.0 |
| mbl fold metallo-hydrolase | YT1_RS24045 | Not Available | Negative | 5049908 - 5051053 | 41110.7 |
| dsre/dsrf/drsh-like family protein | YT1_RS24050 | Not Available | Positive | 5051224 - 5051727 | 18289.4 |
| sulfurtransferase tusa family protein | YT1_RS24055 | Not Available | Positive | 5051753 - 5051986 | 8568.25 |
| 4fe-4s dicluster domain-containing protein | YT1_RS24060 | Not Available | Positive | 5051991 - 5053511 | 54483.8 |
| molybdopterin-dependent oxidoreductase | YT1_RS24065 | Not Available | Positive | 5053555 - 5056443 | 108012.0 |
| mrp/nbp35 family atp-binding protein | YT1_RS24070 | Not Available | Positive | 5056440 - 5057576 | 39367.9 |
| hypothetical protein | YT1_RS24075 | Not Available | Negative | 5057599 - 5058261 | 22053.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


