Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | YT1_RS23930 | Not Available | Negative | 5026331 - 5028769 | 85192.1 |
| hypothetical protein | YT1_RS23935 | Not Available | Negative | 5028961 - 5029968 | 33498.1 |
| hypothetical protein | YT1_RS23940 | Not Available | Negative | 5030179 - 5030430 | 8877.1 |
| duf2892 domain-containing protein | YT1_RS23945 | Not Available | Negative | 5030427 - 5030633 | 7103.56 |
| hypothetical protein | YT1_RS23950 | Not Available | Negative | 5030805 - 5031254 | 15130.5 |
| multicopper oxidase family protein | YT1_RS23955 | Not Available | Negative | 5031285 - 5032814 | 54186.5 |
| shoct domain-containing protein | YT1_RS23960 | Not Available | Negative | 5032872 - 5033102 | 8520.49 |
| response regulator transcription factor | YT1_RS23965 | Not Available | Positive | 5033308 - 5034009 | 25278.4 |
| sensor histidine kinase | YT1_RS23970 | Not Available | Positive | 5034006 - 5035220 | 42213.0 |
| cupin domain-containing protein | YT1_RS23975 | Not Available | Positive | 5035217 - 5035546 | 11595.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


