Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS23780 | Not Available | Negative | 4992979 - 4994070 | 38745.3 |
| glycosyltransferase | YT1_RS23785 | Not Available | Positive | 4994420 - 4995640 | 42818.2 |
| flavin-containing monooxygenase | YT1_RS23790 | Not Available | Positive | 4996173 - 4997660 | 54955.8 |
| serine/threonine-protein kinase | YT1_RS23795 | Not Available | Positive | 4997815 - 4999227 | 47481.1 |
| osmc family protein | YT1_RS23800 | Not Available | Negative | 4999314 - 4999718 | 14420.7 |
| flavodoxin family protein | YT1_RS23805 | Not Available | Positive | 4999861 - 5000475 | 21863.8 |
| abc transporter atp-binding protein | YT1_RS23810 | Not Available | Negative | 5000549 - 5001679 | 40249.6 |
| abc transporter substrate-binding protein | YT1_RS23815 | Not Available | Negative | 5001688 - 5002995 | 46762.5 |
| carbohydrate abc transporter permease | YT1_RS23820 | Not Available | Negative | 5003015 - 5003902 | 32540.5 |
| carbohydrate abc transporter permease | YT1_RS23825 | Not Available | Negative | 5003899 - 5004957 | 39132.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


