Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdr/vanb family oxidoreductase | YT1_RS23730 | Not Available | Positive | 4982748 - 4983698 | 34169.4 |
| response regulator transcription factor | YT1_RS23735 | Not Available | Negative | 4983692 - 4984342 | 24076.9 |
| hypothetical protein | YT1_RS23740 | Not Available | Negative | 4984431 - 4984727 | 11594.2 |
| amidase | YT1_RS23745 | Not Available | Negative | 4984805 - 4986103 | 44532.1 |
| mfs transporter | YT1_RS23750 | Not Available | Positive | 4986269 - 4987699 | 49841.9 |
| flavin reductase family protein | YT1_RS23755 | Not Available | Positive | 4987756 - 4988943 | 43312.6 |
| hypothetical protein | YT1_RS23760 | Not Available | Negative | 4989001 - 4989489 | 18611.2 |
| molybdopterin oxidoreductase family protein | YT1_RS23765 | Not Available | Negative | 4989486 - 4991954 | 89866.7 |
| response regulator | YT1_RS23770 | Not Available | Negative | 4992006 - 4992449 | 16813.2 |
| duf1330 domain-containing protein | YT1_RS23775 | Not Available | Positive | 4992595 - 4992969 | 13731.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


